635 lines
20 KiB
Plaintext
635 lines
20 KiB
Plaintext
# Dates and times
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## Introduction
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This chapter will show you how to work with dates and times in R.
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At first glance, dates and times seem simple.
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You use them all the time in your regular life, and they don't seem to cause much confusion.
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However, the more you learn about dates and times, the more complicated they seem to get.
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To warm up, try these three seemingly simple questions:
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- Does every year have 365 days?
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- Does every day have 24 hours?
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- Does every minute have 60 seconds?
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I'm sure you know that not every year has 365 days, but do you know the full rule for determining if a year is a leap year?
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(It has three parts.) You might have remembered that many parts of the world use daylight savings time (DST), so that some days have 23 hours, and others have 25.
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You might not have known that some minutes have 61 seconds because every now and then leap seconds are added because the Earth's rotation is gradually slowing down.
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Dates and times are hard because they have to reconcile two physical phenomena (the rotation of the Earth and its orbit around the sun) with a whole raft of geopolitical phenomena including months, time zones, and DST.
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This chapter won't teach you every last detail about dates and times, but it will give you a solid grounding of practical skills that will help you with common data analysis challenges.
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### Prerequisites
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This chapter will focus on the **lubridate** package, which makes it easier to work with dates and times in R.
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lubridate is not part of core tidyverse because you only need it when you're working with dates/times.
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We will also need nycflights13 for practice data.
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```{r setup, message = FALSE}
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library(tidyverse)
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library(lubridate)
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library(nycflights13)
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```
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## Creating date/times
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There are three types of date/time data that refer to an instant in time:
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- A **date**.
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Tibbles print this as `<date>`.
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- A **time** within a day.
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Tibbles print this as `<time>`.
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- A **date-time** is a date plus a time: it uniquely identifies an instant in time (typically to the nearest second).
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Tibbles print this as `<dttm>`.
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Elsewhere in R these are called POSIXct, but I don't think that's a very useful name.
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In this chapter we are only going to focus on dates and date-times as R doesn't have a native class for storing times.
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If you need one, you can use the **hms** package.
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You should always use the simplest possible data type that works for your needs.
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That means if you can use a date instead of a date-time, you should.
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Date-times are substantially more complicated because of the need to handle time zones, which we'll come back to at the end of the chapter.
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To get the current date or date-time you can use `today()` or `now()`:
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```{r}
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today()
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now()
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```
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Otherwise, there are three ways you're likely to create a date/time:
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- From a string.
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- From individual date-time components.
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- From an existing date/time object.
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They work as follows.
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### From strings
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Date/time data often comes as strings.
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You've seen one approach to parsing strings into date-times in [date-times](#readr-datetimes).
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Another approach is to use the helpers provided by lubridate.
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They automatically work out the format once you specify the order of the component.
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To use them, identify the order in which year, month, and day appear in your dates, then arrange "y", "m", and "d" in the same order.
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That gives you the name of the lubridate function that will parse your date.
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For example:
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```{r}
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ymd("2017-01-31")
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mdy("January 31st, 2017")
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dmy("31-Jan-2017")
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```
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These functions also take unquoted numbers.
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This is the most concise way to create a single date/time object, as you might need when filtering date/time data.
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`ymd()` is short and unambiguous:
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```{r}
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ymd(20170131)
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```
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`ymd()` and friends create dates.
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To create a date-time, add an underscore and one or more of "h", "m", and "s" to the name of the parsing function:
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```{r}
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ymd_hms("2017-01-31 20:11:59")
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mdy_hm("01/31/2017 08:01")
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```
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You can also force the creation of a date-time from a date by supplying a timezone:
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```{r}
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ymd(20170131, tz = "UTC")
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```
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### From individual components
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Instead of a single string, sometimes you'll have the individual components of the date-time spread across multiple columns.
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This is what we have in the flights data:
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```{r}
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flights %>%
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select(year, month, day, hour, minute)
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```
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To create a date/time from this sort of input, use `make_date()` for dates, or `make_datetime()` for date-times:
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```{r}
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flights %>%
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select(year, month, day, hour, minute) %>%
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mutate(departure = make_datetime(year, month, day, hour, minute))
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```
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Let's do the same thing for each of the four time columns in `flights`.
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The times are represented in a slightly odd format, so we use modulus arithmetic to pull out the hour and minute components.
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Once I've created the date-time variables, I focus in on the variables we'll explore in the rest of the chapter.
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```{r}
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make_datetime_100 <- function(year, month, day, time) {
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make_datetime(year, month, day, time %/% 100, time %% 100)
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}
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flights_dt <- flights %>%
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filter(!is.na(dep_time), !is.na(arr_time)) %>%
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mutate(
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dep_time = make_datetime_100(year, month, day, dep_time),
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arr_time = make_datetime_100(year, month, day, arr_time),
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sched_dep_time = make_datetime_100(year, month, day, sched_dep_time),
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sched_arr_time = make_datetime_100(year, month, day, sched_arr_time)
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) %>%
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select(origin, dest, ends_with("delay"), ends_with("time"))
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flights_dt
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```
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With this data, I can visualise the distribution of departure times across the year:
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```{r}
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flights_dt %>%
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ggplot(aes(dep_time)) +
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geom_freqpoly(binwidth = 86400) # 86400 seconds = 1 day
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```
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Or within a single day:
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```{r}
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flights_dt %>%
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filter(dep_time < ymd(20130102)) %>%
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ggplot(aes(dep_time)) +
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geom_freqpoly(binwidth = 600) # 600 s = 10 minutes
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```
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Note that when you use date-times in a numeric context (like in a histogram), 1 means 1 second, so a binwidth of 86400 means one day.
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For dates, 1 means 1 day.
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### From other types
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You may want to switch between a date-time and a date.
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That's the job of `as_datetime()` and `as_date()`:
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```{r}
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as_datetime(today())
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as_date(now())
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```
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Sometimes you'll get date/times as numeric offsets from the "Unix Epoch", 1970-01-01.
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If the offset is in seconds, use `as_datetime()`; if it's in days, use `as_date()`.
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```{r}
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as_datetime(60 * 60 * 10)
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as_date(365 * 10 + 2)
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```
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### Exercises
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1. What happens if you parse a string that contains invalid dates?
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```{r, eval = FALSE}
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ymd(c("2010-10-10", "bananas"))
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```
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2. What does the `tzone` argument to `today()` do?
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Why is it important?
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3. Use the appropriate lubridate function to parse each of the following dates:
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```{r}
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d1 <- "January 1, 2010"
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d2 <- "2015-Mar-07"
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d3 <- "06-Jun-2017"
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d4 <- c("August 19 (2015)", "July 1 (2015)")
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d5 <- "12/30/14" # Dec 30, 2014
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```
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## Date-time components
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Now that you know how to get date-time data into R's date-time data structures, let's explore what you can do with them.
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This section will focus on the accessor functions that let you get and set individual components.
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The next section will look at how arithmetic works with date-times.
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### Getting components
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You can pull out individual parts of the date with the accessor functions `year()`, `month()`, `mday()` (day of the month), `yday()` (day of the year), `wday()` (day of the week), `hour()`, `minute()`, and `second()`.
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```{r}
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datetime <- ymd_hms("2016-07-08 12:34:56")
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year(datetime)
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month(datetime)
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mday(datetime)
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yday(datetime)
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wday(datetime)
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```
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For `month()` and `wday()` you can set `label = TRUE` to return the abbreviated name of the month or day of the week.
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Set `abbr = FALSE` to return the full name.
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```{r}
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month(datetime, label = TRUE)
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wday(datetime, label = TRUE, abbr = FALSE)
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```
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We can use `wday()` to see that more flights depart during the week than on the weekend:
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```{r}
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flights_dt %>%
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mutate(wday = wday(dep_time, label = TRUE)) %>%
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ggplot(aes(x = wday)) +
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geom_bar()
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```
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There's an interesting pattern if we look at the average departure delay by minute within the hour.
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It looks like flights leaving in minutes 20-30 and 50-60 have much lower delays than the rest of the hour!
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```{r}
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flights_dt %>%
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mutate(minute = minute(dep_time)) %>%
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group_by(minute) %>%
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summarise(
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avg_delay = mean(dep_delay, na.rm = TRUE),
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n = n()) %>%
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ggplot(aes(minute, avg_delay)) +
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geom_line()
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```
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Interestingly, if we look at the *scheduled* departure time we don't see such a strong pattern:
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```{r}
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sched_dep <- flights_dt %>%
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mutate(minute = minute(sched_dep_time)) %>%
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group_by(minute) %>%
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summarise(
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avg_delay = mean(arr_delay, na.rm = TRUE),
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n = n())
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ggplot(sched_dep, aes(minute, avg_delay)) +
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geom_line()
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```
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So why do we see that pattern with the actual departure times?
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Well, like much data collected by humans, there's a strong bias towards flights leaving at "nice" departure times.
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Always be alert for this sort of pattern whenever you work with data that involves human judgement!
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```{r}
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ggplot(sched_dep, aes(minute, n)) +
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geom_line()
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```
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### Rounding
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An alternative approach to plotting individual components is to round the date to a nearby unit of time, with `floor_date()`, `round_date()`, and `ceiling_date()`.
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Each function takes a vector of dates to adjust and then the name of the unit round down (floor), round up (ceiling), or round to.
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This, for example, allows us to plot the number of flights per week:
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```{r}
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flights_dt %>%
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count(week = floor_date(dep_time, "week")) %>%
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ggplot(aes(week, n)) +
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geom_line()
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```
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Computing the difference between a rounded and unrounded date can be particularly useful.
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### Setting components
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You can also use each accessor function to set the components of a date/time:
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```{r}
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(datetime <- ymd_hms("2016-07-08 12:34:56"))
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year(datetime) <- 2020
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datetime
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month(datetime) <- 01
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datetime
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hour(datetime) <- hour(datetime) + 1
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datetime
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```
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Alternatively, rather than modifying in place, you can create a new date-time with `update()`.
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This also allows you to set multiple values at once.
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```{r}
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update(datetime, year = 2020, month = 2, mday = 2, hour = 2)
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```
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If values are too big, they will roll-over:
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```{r}
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ymd("2015-02-01") %>%
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update(mday = 30)
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ymd("2015-02-01") %>%
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update(hour = 400)
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```
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You can use `update()` to show the distribution of flights across the course of the day for every day of the year:
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```{r}
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flights_dt %>%
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mutate(dep_hour = update(dep_time, yday = 1)) %>%
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ggplot(aes(dep_hour)) +
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geom_freqpoly(binwidth = 300)
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```
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Setting larger components of a date to a constant is a powerful technique that allows you to explore patterns in the smaller components.
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### Exercises
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1. How does the distribution of flight times within a day change over the course of the year?
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2. Compare `dep_time`, `sched_dep_time` and `dep_delay`.
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Are they consistent?
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Explain your findings.
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3. Compare `air_time` with the duration between the departure and arrival.
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Explain your findings.
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(Hint: consider the location of the airport.)
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4. How does the average delay time change over the course of a day?
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Should you use `dep_time` or `sched_dep_time`?
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Why?
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5. On what day of the week should you leave if you want to minimise the chance of a delay?
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6. What makes the distribution of `diamonds$carat` and `flights$sched_dep_time` similar?
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7. Confirm my hypothesis that the early departures of flights in minutes 20-30 and 50-60 are caused by scheduled flights that leave early.
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Hint: create a binary variable that tells you whether or not a flight was delayed.
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## Time spans
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Next you'll learn about how arithmetic with dates works, including subtraction, addition, and division.
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Along the way, you'll learn about three important classes that represent time spans:
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- **durations**, which represent an exact number of seconds.
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- **periods**, which represent human units like weeks and months.
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- **intervals**, which represent a starting and ending point.
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### Durations
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In R, when you subtract two dates, you get a difftime object:
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```{r}
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# How old is Hadley?
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h_age <- today() - ymd(19791014)
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h_age
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```
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A difftime class object records a time span of seconds, minutes, hours, days, or weeks.
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This ambiguity can make difftimes a little painful to work with, so lubridate provides an alternative which always uses seconds: the **duration**.
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```{r}
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as.duration(h_age)
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```
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Durations come with a bunch of convenient constructors:
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```{r}
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dseconds(15)
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dminutes(10)
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dhours(c(12, 24))
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ddays(0:5)
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dweeks(3)
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dyears(1)
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```
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Durations always record the time span in seconds.
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Larger units are created by converting minutes, hours, days, weeks, and years to seconds at the standard rate (60 seconds in a minute, 60 minutes in an hour, 24 hours in day, 7 days in a week, 365 days in a year).
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You can add and multiply durations:
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```{r}
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2 * dyears(1)
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dyears(1) + dweeks(12) + dhours(15)
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```
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You can add and subtract durations to and from days:
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```{r}
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tomorrow <- today() + ddays(1)
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last_year <- today() - dyears(1)
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```
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However, because durations represent an exact number of seconds, sometimes you might get an unexpected result:
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```{r}
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one_pm <- ymd_hms("2016-03-12 13:00:00", tz = "America/New_York")
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one_pm
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one_pm + ddays(1)
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```
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Why is one day after 1pm on March 12, 2pm on March 13?!
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If you look carefully at the date you might also notice that the time zones have changed.
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Because of DST, March 12 only has 23 hours, so if we add a full days worth of seconds we end up with a different time.
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### Periods
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To solve this problem, lubridate provides **periods**.
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Periods are time spans but don't have a fixed length in seconds, instead they work with "human" times, like days and months.
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That allows them to work in a more intuitive way:
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```{r}
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one_pm
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one_pm + days(1)
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```
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Like durations, periods can be created with a number of friendly constructor functions.
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```{r}
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seconds(15)
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minutes(10)
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hours(c(12, 24))
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days(7)
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months(1:6)
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weeks(3)
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years(1)
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```
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You can add and multiply periods:
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```{r}
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10 * (months(6) + days(1))
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days(50) + hours(25) + minutes(2)
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```
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And of course, add them to dates.
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Compared to durations, periods are more likely to do what you expect:
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```{r}
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# A leap year
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ymd("2016-01-01") + dyears(1)
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ymd("2016-01-01") + years(1)
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# Daylight Savings Time
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one_pm + ddays(1)
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one_pm + days(1)
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```
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Let's use periods to fix an oddity related to our flight dates.
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Some planes appear to have arrived at their destination *before* they departed from New York City.
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```{r}
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flights_dt %>%
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filter(arr_time < dep_time)
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```
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These are overnight flights.
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We used the same date information for both the departure and the arrival times, but these flights arrived on the following day.
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We can fix this by adding `days(1)` to the arrival time of each overnight flight.
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```{r}
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flights_dt <- flights_dt %>%
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mutate(
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overnight = arr_time < dep_time,
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arr_time = arr_time + days(ifelse(overnight, 0, 1)),
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sched_arr_time = sched_arr_time + days(overnight * 1)
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)
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```
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Now all of our flights obey the laws of physics.
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```{r}
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flights_dt %>%
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filter(overnight, arr_time < dep_time)
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```
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### Intervals
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It's obvious what `dyears(1) / ddays(365)` should return: one, because durations are always represented by a number of seconds, and a duration of a year is defined as 365 days worth of seconds.
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What should `years(1) / days(1)` return?
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Well, if the year was 2015 it should return 365, but if it was 2016, it should return 366!
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There's not quite enough information for lubridate to give a single clear answer.
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What it does instead is give an estimate, with a warning:
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```{r}
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years(1) / days(1)
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```
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If you want a more accurate measurement, you'll have to use an **interval**.
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An interval is a duration with a starting point: that makes it precise so you can determine exactly how long it is:
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```{r}
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next_year <- today() + years(1)
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(today() %--% next_year) / ddays(1)
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```
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To find out how many periods fall into an interval, you need to use integer division:
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|
|
|
```{r}
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(today() %--% next_year) %/% days(1)
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|
```
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|
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|
### Summary
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|
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How do you pick between duration, periods, and intervals?
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As always, pick the simplest data structure that solves your problem.
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If you only care about physical time, use a duration; if you need to add human times, use a period; if you need to figure out how long a span is in human units, use an interval.
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|
|
|
Figure \@ref(fig:dt-algebra) summarises permitted arithmetic operations between the different data types.
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|
|
|
```{r dt-algebra, echo = FALSE, fig.cap = "The allowed arithmetic operations between pairs of date/time classes."}
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knitr::include_graphics("diagrams/datetimes-arithmetic.png")
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|
```
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|
|
|
### Exercises
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|
|
|
1. Explain `days(overnight * 1)` to someone who has just started learning R.
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|
How does it work?
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|
|
|
2. Create a vector of dates giving the first day of every month in 2015.
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|
Create a vector of dates giving the first day of every month in the *current* year.
|
|
|
|
3. Write a function that given your birthday (as a date), returns how old you are in years.
|
|
|
|
4. Why can't `(today() %--% (today() + years(1))) / months(1)` work?
|
|
|
|
## Time zones
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|
|
|
Time zones are an enormously complicated topic because of their interaction with geopolitical entities.
|
|
Fortunately we don't need to dig into all the details as they're not all important for data analysis, but there are a few challenges we'll need to tackle head on.
|
|
|
|
The first challenge is that everyday names of time zones tend to be ambiguous.
|
|
For example, if you're American you're probably familiar with EST, or Eastern Standard Time.
|
|
However, both Australia and Canada also have EST!
|
|
To avoid confusion, R uses the international standard IANA time zones.
|
|
These use a consistent naming scheme "<area>/<location>", typically in the form "\<continent\>/\<city\>" (there are a few exceptions because not every country lies on a continent).
|
|
Examples include "America/New_York", "Europe/Paris", and "Pacific/Auckland".
|
|
|
|
You might wonder why the time zone uses a city, when typically you think of time zones as associated with a country or region within a country.
|
|
This is because the IANA database has to record decades worth of time zone rules.
|
|
In the course of decades, countries change names (or break apart) fairly frequently, but city names tend to stay the same.
|
|
Another problem is that the name needs to reflect not only the current behaviour, but also the complete history.
|
|
For example, there are time zones for both "America/New_York" and "America/Detroit".
|
|
These cities both currently use Eastern Standard Time but in 1969-1972 Michigan (the state in which Detroit is located), did not follow DST, so it needs a different name.
|
|
It's worth reading the raw time zone database (available at <http://www.iana.org/time-zones>) just to read some of these stories!
|
|
|
|
You can find out what R thinks your current time zone is with `Sys.timezone()`:
|
|
|
|
```{r}
|
|
Sys.timezone()
|
|
```
|
|
|
|
(If R doesn't know, you'll get an `NA`.)
|
|
|
|
And see the complete list of all time zone names with `OlsonNames()`:
|
|
|
|
```{r}
|
|
length(OlsonNames())
|
|
head(OlsonNames())
|
|
```
|
|
|
|
In R, the time zone is an attribute of the date-time that only controls printing.
|
|
For example, these three objects represent the same instant in time:
|
|
|
|
```{r}
|
|
(x1 <- ymd_hms("2015-06-01 12:00:00", tz = "America/New_York"))
|
|
(x2 <- ymd_hms("2015-06-01 18:00:00", tz = "Europe/Copenhagen"))
|
|
(x3 <- ymd_hms("2015-06-02 04:00:00", tz = "Pacific/Auckland"))
|
|
```
|
|
|
|
You can verify that they're the same time using subtraction:
|
|
|
|
```{r}
|
|
x1 - x2
|
|
x1 - x3
|
|
```
|
|
|
|
Unless otherwise specified, lubridate always uses UTC.
|
|
UTC (Coordinated Universal Time) is the standard time zone used by the scientific community and roughly equivalent to its predecessor GMT (Greenwich Mean Time).
|
|
It does not have DST, which makes a convenient representation for computation.
|
|
Operations that combine date-times, like `c()`, will often drop the time zone.
|
|
In that case, the date-times will display in your local time zone:
|
|
|
|
```{r}
|
|
x4 <- c(x1, x2, x3)
|
|
x4
|
|
```
|
|
|
|
You can change the time zone in two ways:
|
|
|
|
- Keep the instant in time the same, and change how it's displayed.
|
|
Use this when the instant is correct, but you want a more natural display.
|
|
|
|
```{r}
|
|
x4a <- with_tz(x4, tzone = "Australia/Lord_Howe")
|
|
x4a
|
|
x4a - x4
|
|
```
|
|
|
|
(This also illustrates another challenge of times zones: they're not all integer hour offsets!)
|
|
|
|
- Change the underlying instant in time.
|
|
Use this when you have an instant that has been labelled with the incorrect time zone, and you need to fix it.
|
|
|
|
```{r}
|
|
x4b <- force_tz(x4, tzone = "Australia/Lord_Howe")
|
|
x4b
|
|
x4b - x4
|
|
```
|