851 lines
34 KiB
Plaintext
851 lines
34 KiB
Plaintext
# Regular expressions {#sec-regular-expressions}
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```{r}
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#| results: "asis"
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#| echo: false
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source("_common.R")
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status("polishing")
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```
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## Introduction
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In @sec-strings, you learned a whole bunch of useful functions for working with strings.
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In this this chapter we'll learn even more focusing on functions that use **regular expressions**, are a concise and powerful language for describing patterns within strings.
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The term "regular expression" is a bit of a mouthful, so most people abbreviate to "regex"[^regexps-1] or "regexp".
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[^regexps-1]: You can pronounce with either a hard-g (reg-x) or a soft-g (rej-x).
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The chapter starts with the basics of regular expressions and the most useful stringr functions for data analysis.
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We'll then expand your knowledge of patterns, to cover seven important new topics (escaping, anchoring, character classes, shorthand classes, quantifiers, precedence, and grouping).
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Next we'll talk about some of the other types of pattern that stringr functions can work with, and the various "flags" that allow you to tweak the operation of regular expressions.
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We'll finish up with a survey of other places in stringr, the tidyverse, and base R where you might use regexes.
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### Prerequisites
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In this chapter, we'll use regular expression functions from stringr and tidyr, both core members of the tidyverse, as well as data from the babynames package.
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```{r}
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#| label: setup
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#| message: false
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library(tidyverse)
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library(babynames)
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```
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Through this chapter we'll use a mix of very simple inline examples so you can get the basic idea, the baby names data, and three character vectors from stringr:
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- `fruit` contains the names of 80 fruits.
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- `words` contains 980 common English words.
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- `sentences` contains 720 short sentences.
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## Pattern basics {#sec-reg-basics}
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We'll use with `str_view()` to learn how regex patterns work.
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We used `str_view()` in the last chapter to better understand a string vs its printed representation, and now we'll use it with its second argument, a regular expression.
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When this is supplied, `str_view()` will show only the elements of the string the match, surrounding each match with `<>`, and, where possible, highlight the match in blue.
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The simplest patterns consist of letters and numbers, which match those characters exactly:
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```{r}
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str_view(fruit, "berry")
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str_view(fruit, "BERRY")
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```
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While letter and number match exactly, punctuation characters like `.`, `+`, `*`, `[`, `]`, `?` have special meanings[^regexps-2].
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For example, `.`
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will match any character[^regexps-3], so `"a."` will match any string that contains an "a" followed by another character
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:
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[^regexps-2]: You'll learn how to escape these special meanings in @sec-regexp-escaping.
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[^regexps-3]: Well, any character apart from `\n`.
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```{r}
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str_view(c("a", "ab", "ae", "bd", "ea", "eab"), "a.")
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```
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Or we could find all the fruits that contain an "a", followed by three letters, followed by an "e":
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```{r}
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str_view(fruit, "a...e")
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```
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**Quantifiers** control how many times a pattern can match: `?` makes a pattern optional (i.e. it matches 0 or 1 times), `+` lets a pattern repeat (i.e. it matches at least once), and `*` lets a pattern be optional or repeat (i.e. it matches any number of times, including 0).
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```{r}
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# ab? matches an "a", optionally followed by a "b".
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str_view(c("a", "ab", "abb"), "ab?")
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# ab+ matches an "a", followed by at least one "b".
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str_view(c("a", "ab", "abb"), "ab+")
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# ab* matches an "a", followed by any number of "b"s.
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str_view(c("a", "ab", "abb"), "ab*")
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```
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**Character classes** are defined by `[]` and let you match a set set of characters, e.g. `[abcd]` matches "a", "b", "c", or "d".
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You can also invert the match by starting with `^`: `[^abcd]` matches anything **except** "a", "b", "c", or "d".
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We can use this idea to find the words with three vowels or four consonants in a row:
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```{r}
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str_view(words, "[aeiou][aeiou][aeiou]")
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str_view(words, "[^aeiou][^aeiou][^aeiou][^aeiou]")
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```
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You can combine character classes and quantifiers.
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For example, the following regexp looks for two vowel followed by two or more consonants:
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```{r}
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str_view(words, "[aeiou][aeiou][^aeiou][^aeiou]+")
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```
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(We'll learn some more elegant ways to express these ideas in @sec-quantifiers.)
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You can use **alternation**, `|` to pick between one or more alternative patterns.
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For example, the following patterns look for fruits containing "apple", "pear", or "banana", or a repeated vowel.
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```{r}
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str_view(fruit, "apple|pear|banana")
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str_view(fruit, "aa|ee|ii|oo|uu")
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```
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Regular expressions are very compact and use a lot of punctuation characters, so they can seem overwhelming and hard to read at first.
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Don't worry; you'll get better with practice, and simple patterns will soon become second nature.
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Lets start kick of that process by practicing with some useful stringr functions.
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### Exercises
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## Key functions
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Now that you've got the basics of regular expressions under your belt, lets use them with some stringr and tidyr functions.
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In the following section, you'll learn about how to detect the presence or absence of a match, how to count the number of matches, how to replace a match with fixed text, and how to extract text using a pattern.
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### Detect matches
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`str_detect()` returns a logical vector that says is `TRUE` is the pattern matched an element of the character vector, and `FALSE` otherwise:
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```{r}
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str_detect(c("a", "b", "c"), "[aeiou]")
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```
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Since `str_detect()` returns a logical vector the same length as the vector, it pairs well with `filter()`.
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For example, this code finds all the most popular names containing a lower-case "x":
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```{r}
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babynames |>
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filter(str_detect(name, "x")) |>
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count(name, wt = n, sort = TRUE)
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```
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We can also use `str_detect()` with `summarize()` by pairing it with `sum()` or `mean()`: `sum(str_detect(x, pattern))` tells you the number of observations that match and `mean(str_detect(x, pattern))` tells you the proportion that match.
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For example, the following snippet computes and visualizes the proportion of baby names[^regexps-4] that contain "x", broken down by year.
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It looks like they've radically increased in popularity lately!
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[^regexps-4]: This gives us the proportion of **names** that contain an "x"; if you wanted the proportion of babies with a name containing an x, you'd need to perform a weighted mean.
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```{r}
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#| label: fig-x-names
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#| fig-cap: >
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#| A time series showing the proportion of baby names that contain a
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#| lower case "x".
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#| fig-alt: >
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#| A timeseries showing the proportion of baby names that contain the letter x.
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#| The proportion declines gradually from 8 per 1000 in 1880 to 4 per 1000 in
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#| 1980, then increases rapidly to 16 per 1000 in 2019.
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babynames |>
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group_by(year) |>
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summarise(prop_x = mean(str_detect(name, "x"))) |>
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ggplot(aes(year, prop_x)) +
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geom_line()
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```
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There are two functions that are closely related to `str_detect()`: `str_subset()` returns just the strings that contain a match, and `str_which()` returns the locations of strings that have a match:
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```{r}
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str_subset(c("a", "b", "c"), "[aeiou]")
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str_which(c("a", "b", "c"), "[aeiou]")
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```
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### Count matches
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The next step up in complexity from `str_detect()` is `str_count()`: rather than a simple true or false, it tells you how many matches there are in each string.
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```{r}
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x <- c("apple", "banana", "pear")
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str_count(x, "p")
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```
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Note that each match starts at the end of the previous match; i.e. regex matches never overlap.
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For example, in `"abababa"`, how many times will the pattern `"aba"` match?
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Regular expressions say two, not three:
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```{r}
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str_count("abababa", "aba")
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str_view("abababa", "aba")
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```
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It's natural to use `str_count()` with `mutate()`.
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The following example uses `str_count()` with character classes to count the number of vowels and consonants in each name.
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```{r}
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babynames |>
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count(name) |>
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mutate(
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vowels = str_count(name, "[aeiou]"),
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consonants = str_count(name, "[^aeiou]")
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)
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```
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If you look closely, you'll notice that there's something off with our calculations: "Aaban" contains three "a"s, but our summary reports only two vowels.
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That's because regular expressions are case sensitive.
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There are three ways we could fix this:
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- Add the upper case vowels to the character class: `str_count(name, "[aeiouAEIOU]")`.
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- Tell the regular expression to ignore case: `str_count(regex(name, ignore_case = TRUE), "[aeiou]")`. We'll talk about more in @sec-flags.
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- Use `str_to_lower()` to convert the names to lower case: `str_count(str_to_lower(name), "[aeiou]")`. You learned about this function in @sec-other-languages.
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This variety of approaches is pretty typical when working with strings --- there are often multiple ways to reach your goal, either by making your pattern more complicated or by doing some preprocessing on your string.
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If you get stuck trying one approach, it can often be useful to switch gears and tackle the problem from a different perspective.
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In this case, since we're applying two functions to the name, I think it's easier to transform it first:
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```{r}
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babynames |>
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count(name) |>
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mutate(
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name = str_to_lower(name),
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vowels = str_count(name, "[aeiou]"),
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consonants = str_count(name, "[^aeiou]")
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)
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```
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### Replace values
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As well as detecting and counting matches, we can also modify them with `str_replace()` and `str_replace_all()`.
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`str_replace()` replaces the first match, and as the name suggests, `str_replace_all()` replaces all matches.
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```{r}
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x <- c("apple", "pear", "banana")
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str_replace_all(x, "[aeiou]", "-")
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```
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`str_remove()` and `str_remove_all()` are handy shortcuts for `str_replace(x, pattern, "")`.
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```{r}
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x <- c("apple", "pear", "banana")
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str_remove_all(x, "[aeiou]")
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```
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These functions are naturally paired with `mutate()` when doing data cleaning., and you'll often apply them repeatedly to peel off layers of inconsistent formatting.
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### Extract variables
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The last function comes from tidyr: `separate_wider_regex()`.
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This works similarly to `separate_wider_location()` and `separate_wider_delim()` but you give it a vector of regular expressions rather than a vector widths or a delimiter.
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<!-- TODO: complete once tidyr has a nice dataset -->
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### Exercises
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1. What baby name has the most vowels?
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What name has the highest proportion of vowels?
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(Hint: what is the denominator?)
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2. Replace all forward slashes in a string with backslashes.
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3. Implement a simple version of `str_to_lower()` using `str_replace_all()`.
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4. Switch the first and last letters in `words`.
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Which of those strings are still `words`?
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## Pattern details
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Now that you understand the basics of the pattern language and how it use it with some stringr and tidyr functions, its time to dig into more of the details.
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First, we'll start with **escaping**, which allows you to match characters that the pattern language otherwise treats specially.
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Next you'll learn about **anchors**, which allow you to match the start or end of the string.
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Then you'll more learn about **character classes** and their shortcuts, which allow you to match any character from a set.
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Next you'll learn the final details of **quantifiers**, which control how many times a pattern can match.
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Then we have to cover the important (but complex) topic of **operator precedence** and parentheses.
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And we'll finish off with some details of **grouping** components of the pattern.
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The terms we use here are the technical names for each component.
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They're not always the most evocative of their purpose, but it's very helpful to know the correct terms if you later want to Google for more details.
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We'll concentrate on showing how these patterns work with `str_view()`; remember that you can use them with any of the functions that you learned above.
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### Escaping {#sec-regexp-escaping}
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In order to match a literal `.`, you need an **escape**, which tells the regular expression to ignore the special behavior and match exactly.
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Like strings, regexps use the backslash for escaping, so to match a `.`, you need the regexp `\.`.
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Unfortunately this creates a problem.
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We use strings to represent regular expressions, and `\` is also used as an escape symbol in strings.
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So, as the following example shows, to create the regular expression `\.` we need the string `"\\."`.
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```{r}
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# To create the regular expression \., we need to use \\.
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dot <- "\\."
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# But the expression itself only contains one \
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str_view(dot)
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# And this tells R to look for an explicit .
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str_view(c("abc", "a.c", "bef"), "a\\.c")
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```
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In this book, we'll usually write regular expression without quotes, like `\.`.
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If we need to emphasize what you'll actually type, we'll surround it with quotes and add extra escapes, like `"\\."`.
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If `\` is used as an escape character in regular expressions, how do you match a literal `\`?
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Well you need to escape it, creating the regular expression `\\`.
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To create that regular expression, you need to use a string, which also needs to escape `\`.
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That means to match a literal `\` you need to write `"\\\\"` --- you need four backslashes to match one!
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```{r}
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x <- "a\\b"
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str_view(x)
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str_view(x, "\\\\")
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```
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Alternatively, you might find it easier to use the raw strings you learned about in @sec-raw-strings).
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That lets you to avoid one layer of escaping:
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```{r}
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str_view(x, r"{\\}")
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```
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The full set of characters with special meanings that need to be escaped is `.^$\|*+?{}[]()`.
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In general, look at punctuation characters with suspicion; if your regular expression isn't matching what you think it should, check if you've used any of these characters.
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### Anchors
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By default, regular expressions will match any part of a string.
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If you want to match at the start of end you need to **anchor** the regular expression using `^` to match the start of the string or `$` to match the end of the string:
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```{r}
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str_view(fruit, "^a")
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str_view(fruit, "a$")
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```
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It's tempting to think that `$` should matches the start of a string, because that's how we write dollar amounts, but it's not what regular expressions want.
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To force a regular expression to only the full string, anchor it with both `^` and `$`:
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```{r}
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str_view(fruit, "apple")
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str_view(fruit, "^apple$")
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```
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You can also match the boundary between words (i.e. the start or end of a word) with `\b`.
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This can be particularly when using RStudio's find and replace tool.
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For example, if to find all uses of `sum()`, you can search for `\bsum\b` to avoid matching `summarise`, `summary`, `rowsum` and so on:
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```{r}
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x <- c("summary(x)", "summarise(df)", "rowsum(x)", "sum(x)")
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str_view(x, "sum")
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str_view(x, "\\bsum\\b")
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```
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When used alone, anchors will produce a zero-width match:
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```{r}
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str_view("abc", c("$", "^", "\\b"))
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```
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This helps you understand what happens when you replace a standalone anchor:
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```{r}
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str_replace_all("abc", c("$", "^", "\\b"), "--")
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```
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### Character classes
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A **character class**, or character **set**, allows you to match any character in a set.
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As we discussed above, you can construct your own sets with `[]`, where `[abc]` matches a, b, or c.
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There are three characters that have special meaning inside of `[]:`
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- `-` defines a range, e.g. `[a-z]`: matches any lower case letter and `[0-9]` matches any number.
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- `^` takes the inverse of the set, e.g. `[^abc]`: matches anything except a, b, or c.
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- `\` escapes special characters, so `[\^\-\]]`: matches `^`, `-`, or `]`.
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Here are few examples:
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```{r}
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x <- "abcd ABCD 12345 -!@#%."
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str_view(x, "[abc]+")
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str_view(x, "[a-z]+")
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str_view(x, "[^a-z0-9]+")
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# You need an escape to match characters that are otherwise
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# special inside of []
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str_view("a-b-c", "[a-c]")
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str_view("a-b-c", "[a\\-c]")
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```
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Some character classes are used so commonly that they get their own shortcut.
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You've already seen `.`, which matches any character apart from a newline.
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There are three other particularly useful pairs[^regexps-5]:
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[^regexps-5]: Remember, to create a regular expression containing `\d` or `\s`, you'll need to escape the `\` for the string, so you'll type `"\\d"` or `"\\s"`.
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- `\d`: matches any digit;\
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`\D`: matches anything that isn't a digit.
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- `\s`: matches any whitespace (e.g. space, tab, newline);\
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`\S`: matches anything that isn't whitespace.
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- `\w`: matches any "word" character, i.e. letters and numbers;\
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`\W`: matches any "non-word" character.
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The following code demonstrates the six shortcuts with a selection of letters, numbers, and punctuation characters.
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```{r}
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x <- "abcd ABCD 12345 -!@#%."
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str_view(x, "\\d+")
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str_view(x, "\\D+")
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str_view(x, "\\w+")
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str_view(x, "\\W+")
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str_view(x, "\\s+")
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str_view(x, "\\S+")
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```
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### Quantifiers {#sec-quantifiers}
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**Quantifiers** control how many times a pattern matches.
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In @sec-reg-basics you learned about `?` (0 or 1 matches), `+` (1 or more matches), and `*` (0 or more matches).
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For example, `colou?r` will match American or British spelling, `\d+` will match one or more digits, and `\s?` will optionally match a single item of whitespace.
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You can also specify the number of matches precisely with `{}`:
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- `{n}` matches exactly n times.
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- `{n,}` matches at least n times.
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- `{n,m}` matches between n and m times.
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The following code shows how this works for a few simple examples:
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```{r}
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x <- "-- -x- -xx- -xxx- -xxxx- -xxxxx-"
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str_view(x, "-x?-") # [0, 1]
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str_view(x, "-x+-") # [1, Inf)
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str_view(x, "-x*-") # [0, Inf)
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str_view(x, "-x{2}-") # [2. 2]
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str_view(x, "-x{2,}-") # [2, Inf)
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str_view(x, "-x{2,3}-") # [2, 3]
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```
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### Operator precedence and parentheses
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What does `ab+` match?
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Does it match "a" followed by one or more "b"s, or does it match "ab" repeated any number of times?
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What does `^a|b$` match?
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Does it match the complete string a or the complete string b, or does it match a string starting with a or a string starting with "b"?
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|
||
The answer to these questions is determined by operator precedence, similar to the PEMDAS or BEDMAS rules you might have learned in school.
|
||
You know that `a + b * c` is equivalent to `a + (b * c)` not `(a + b) * c` because `*` has higher precedence and `+` has lower precedence: you compute `*` before `+`.
|
||
Similarly, regular expressions have their own precedence rules: quantifiers have high precedence and alternation has low precedence which means that `ab+` is equivalent to `a(b+)`, and `^a|b$` is equivalent to `(^a)|(b$)`.
|
||
Just like with algebra, you can use parentheses to override the usual order.
|
||
But unlike algebra you're unlikely to remember the precedence rules for regexes, so feel free to use parentheses liberally.
|
||
|
||
### Grouping and capturing
|
||
|
||
As well overriding operator precedence, parentheses have another important effect: they create **capturing groups** that allow you to use to sub-components of the match.
|
||
|
||
The first way to use a capturing group is to refer back to it within a match with **back reference**: `\1` refers to the match contained in the first parenthesis, `\2` in the second parenthesis, and so on.
|
||
For example, the following pattern finds all fruits that have a repeated pair of letters:
|
||
|
||
```{r}
|
||
str_view(fruit, "(..)\\1")
|
||
```
|
||
|
||
And this one finds all words that start and end with the same pair of letters:
|
||
|
||
```{r}
|
||
str_view(words, "^(..).*\\1$")
|
||
```
|
||
|
||
You can also use back references in `str_replace()`.
|
||
For example, this code switches the order of the second and third words in `sentences`:
|
||
|
||
```{r}
|
||
sentences |>
|
||
str_replace("(\\w+) (\\w+) (\\w+)", "\\1 \\3 \\2") |>
|
||
str_view()
|
||
```
|
||
|
||
If you want extract the matches for each group you can use `str_match()`.
|
||
But `str_match()` returns a matrix, so it's not particularly easy to work with[^regexps-6]:
|
||
|
||
[^regexps-6]: Mostly because we never discuss matrices in this book!
|
||
|
||
```{r}
|
||
sentences |>
|
||
str_match("the (\\w+) (\\w+)") |>
|
||
head()
|
||
```
|
||
|
||
You could convert to a tibble and name the columns:
|
||
|
||
```{r}
|
||
sentences |>
|
||
str_match("the (\\w+) (\\w+)") |>
|
||
as_tibble(.name_repair = "minimal") |>
|
||
set_names("match", "word1", "word2")
|
||
```
|
||
|
||
But then you've basically recreated your own version of `separate_wider_regex()`.
|
||
And indeed, behind the scenes `separate_wider_regex()` converts your vector of patterns to a single regex that uses grouping to capture the named components.
|
||
|
||
Occasionally, you'll want to use parentheses without creating matching groups.
|
||
You can create a non-capturing group with `(?:)`.
|
||
|
||
```{r}
|
||
x <- c("a gray cat", "a grey dog")
|
||
str_match(x, "gr(e|a)y")
|
||
str_match(x, "gr(?:e|a)y")
|
||
```
|
||
|
||
### Exercises
|
||
|
||
1. How would you match the literal string `"'\`? How about `"$^$"`?
|
||
|
||
2. Explain why each of these patterns don't match a `\`: `"\"`, `"\\"`, `"\\\"`.
|
||
|
||
3. Given the corpus of common words in `stringr::words`, create regular expressions that find all words that:
|
||
|
||
a. Start with "y".
|
||
b. Don't start with "y".
|
||
c. End with "x".
|
||
d. Are exactly three letters long. (Don't cheat by using `str_length()`!)
|
||
e. Have seven letters or more.
|
||
f. Contain a vowel-consonant pair
|
||
g. Contain at least two vowel-consonant pairs in a row
|
||
h. Only consist of repeated vowel-consonant pairs.
|
||
|
||
4. Create 11 regular expressions that match the British or American spellings for each of the following words: grey/gray, modelling/modeling, summarize/summarise, aluminium/aluminum, defence/defense, analog/analogue, center/centre, sceptic/skeptic, aeroplane/airplane, arse/ass, doughnut/donut.
|
||
Try and make the shortest possible regex!
|
||
|
||
5. Create a regular expression that will match telephone numbers as commonly written in your country.
|
||
|
||
6. Describe in words what these regular expressions match: (read carefully to see if each entry is a regular expression or a string that defines a regular expression.)
|
||
|
||
a. `^.*$`
|
||
b. `"\\{.+\\}"`
|
||
c. `\d{4}-\d{2}-\d{2}`
|
||
d. `"\\\\{4}"`
|
||
e. `\..\..\..`
|
||
f. `(.)\1\1`
|
||
g. `"(..)\\1"`
|
||
|
||
7. Solve the beginner regexp crosswords at <https://regexcrossword.com/challenges/beginner>.
|
||
|
||
## Pattern control
|
||
|
||
It's possible to exercise extra control over the details of the match by using a special pattern object instead of just a string.
|
||
This allows you control the so called regex flags and match various types of fixed strings, as described below.
|
||
|
||
### Regex flags {#sec-flags}
|
||
|
||
There are a number of settings that can use to control the details of the regexp, which are often called **flags** in other programming languages.
|
||
In stringr, you can use these by wrapping the pattern in a call to `regex()`.
|
||
The most useful flag is probably `ignore_case = TRUE` because it allows characters to match either their uppercase or lowercase forms:
|
||
|
||
```{r}
|
||
bananas <- c("banana", "Banana", "BANANA")
|
||
str_view(bananas, "banana")
|
||
str_view(bananas, regex("banana", ignore_case = TRUE))
|
||
```
|
||
|
||
If you're doing a lot of work with multiline strings (i.e. strings that contain `\n`), `dotall`and `multiline` also be useful.
|
||
`dotall = TRUE` lets `.` match everything, including `\n`:
|
||
|
||
```{r}
|
||
x <- "Line 1\nLine 2\nLine 3"
|
||
str_view(x, ".Line")
|
||
str_view(x, regex(".Line", dotall = TRUE))
|
||
```
|
||
|
||
And `multiline = TRUE` makes `^` and `$` match the start and end of each line rather than the start and end of the complete string:
|
||
|
||
```{r}
|
||
x <- "Line 1\nLine 2\nLine 3"
|
||
str_view(x, "^Line")
|
||
str_view(x, regex("^Line", multiline = TRUE))
|
||
```
|
||
|
||
Finally, if you're writing a complicated regular expression and you're worried you might not understand it in the future, you might find `comments = TRUE` to be useful.
|
||
It ignores spaces and new lines, as well is everything after `#`, allowing you to use comments and whitespace to make complex regular expressions more understandable[^regexps-7].
|
||
|
||
[^regexps-7]: `comments = TRUE` is particularly effective in combination with a raw string, as we use here.
|
||
|
||
```{r}
|
||
phone <- regex(
|
||
r"(
|
||
\(? # optional opening parens
|
||
(\d{3}) # area code
|
||
[)\ -]? # optional closing parens, space, or dash
|
||
(\d{3}) # another three numbers
|
||
[\ -]? # optional space or dash
|
||
(\d{3}) # three more numbers
|
||
)",
|
||
comments = TRUE
|
||
)
|
||
|
||
str_match("514-791-8141", phone)
|
||
```
|
||
|
||
If you're using comments and want to match a space, newline, or `#`, you'll need to escape it:
|
||
|
||
```{r}
|
||
str_view("x x #", regex(r"(x #)", comments = TRUE))
|
||
str_view("x x #", regex(r"(x\ \#)", comments = TRUE))
|
||
```
|
||
|
||
### Fixed matches
|
||
|
||
You can opt-out of the regular expression rules by using `fixed()`:
|
||
|
||
```{r}
|
||
str_view(c("", "a", "."), fixed("."))
|
||
```
|
||
|
||
`fixed()` also gives you the ability to ignore case:
|
||
|
||
```{r}
|
||
str_view("x X", "X")
|
||
str_view("x X", fixed("X", ignore_case = TRUE))
|
||
```
|
||
|
||
If you're working with non-English text, you should generally use `coll()` instead, as it implements the full rules for capitalization as used by the `locale` you specify.
|
||
See \@#sec-other-languages for more details.
|
||
|
||
```{r}
|
||
str_view("i İ ı I", fixed("İ", ignore_case = TRUE))
|
||
str_view("i İ ı I", coll("İ", ignore_case = TRUE, locale = "tr"))
|
||
```
|
||
|
||
## Practice
|
||
|
||
To put these ideas in practice we'll solve a few semi-authentic problems to show you how you might iteratively solve a more complex problem.
|
||
We'll discuss three general techniques: checking you work by creating simple positive and negative controls, combining regular expressions with Boolean algebra, and creating complex patterns using string manipulation.
|
||
|
||
### Check your work
|
||
|
||
First, let's find all sentences that start with "The".
|
||
Using the `^` anchor alone is not enough:
|
||
|
||
```{r}
|
||
str_view(sentences, "^The")
|
||
```
|
||
|
||
Because it all matches sentences starting with `They` or `Those`.
|
||
We need to make sure that the "e" is the last letter in the word, which we can do by adding adding a word boundary:
|
||
|
||
```{r}
|
||
str_view(sentences, "^The\\b")
|
||
```
|
||
|
||
What about finding all sentences that begin with a pronoun?
|
||
|
||
```{r}
|
||
str_view(sentences, "^She|He|It|They\\b")
|
||
```
|
||
|
||
A quick inspection of the results shows that we're getting some spurious matches.
|
||
That's because we've forgotten to use parentheses:
|
||
|
||
```{r}
|
||
str_view(sentences, "^(She|He|It|They)\\b")
|
||
```
|
||
|
||
You might wonder how you might spot such a mistake if it didn't occur in the first few matches.
|
||
A good technique is to create a few positive and negative matches and use them to test that you pattern works as expected.
|
||
|
||
```{r}
|
||
pos <- c("He is a boy", "She had a good time")
|
||
neg <- c("Shells come from the sea", "Hadley said 'It's a great day'")
|
||
|
||
pattern <- "^(She|He|It|They)\\b"
|
||
str_detect(pos, pattern)
|
||
str_detect(neg, pattern)
|
||
```
|
||
|
||
It's typically much easier to come up with positive examples than negative examples, because it takes some time until you're good enough with regular expressions to predict where your weaknesses are.
|
||
Nevertheless they're still useful; even if you don't get them correct right away, you can slowly accumulate them as you work on your problem.
|
||
If you later get more into programming and learn about unit tests, you can then turn these examples into automated tests that ensure you never make the same mistake twice.
|
||
|
||
### Boolean operations {#sec-boolean-operations}
|
||
|
||
Imagine we want to find words that only contain consonants.
|
||
One technique is to create a character class that contains all letters except for the vowels (`[^aeiou]`), then allow that to match any number of letters (`[^aeiou]+`), then force it to match the whole string by anchoring to the beginning and the end (`^[^aeiou]+$`):
|
||
|
||
```{r}
|
||
str_view(words, "^[^aeiou]+$")
|
||
```
|
||
|
||
But we can make this problem a bit easier by flipping the problem around.
|
||
Instead of looking for words that contain only consonants, we could look for words that don't contain any vowels:
|
||
|
||
```{r}
|
||
words[!str_detect(words, "[aeiou]")]
|
||
```
|
||
|
||
This is a useful technique whenever you're dealing with logical combinations, particularly those involving "and" or "not".
|
||
For example, imagine if you want to find all words that contain "a" and "b".
|
||
There's no "and" operator built in to regular expressions so we have to tackle it by looking for all words that contain an "a" followed by a "b", or a "b" followed by an "a":
|
||
|
||
```{r}
|
||
words[str_detect(words, "a.*b|b.*a")]
|
||
```
|
||
|
||
It's simpler to combine the results of two calls to `str_detect()`:
|
||
|
||
```{r}
|
||
words[str_detect(words, "a") & str_detect(words, "b")]
|
||
```
|
||
|
||
What if we wanted to see if there was a word that contains all vowels?
|
||
If we did it with patterns we'd need to generate 5!
|
||
(120) different patterns:
|
||
|
||
```{r}
|
||
#| results: false
|
||
words[str_detect(words, "a.*e.*i.*o.*u")]
|
||
# ...
|
||
words[str_detect(words, "u.*o.*i.*e.*a")]
|
||
```
|
||
|
||
It's much simpler to combine six calls to `str_detect()`:
|
||
|
||
```{r}
|
||
words[
|
||
str_detect(words, "a") &
|
||
str_detect(words, "e") &
|
||
str_detect(words, "i") &
|
||
str_detect(words, "o") &
|
||
str_detect(words, "u")
|
||
]
|
||
```
|
||
|
||
In general, if you get stuck trying to create a single regexp that solves your problem, take a step back and think if you could break the problem down into smaller pieces, solving each challenge before moving onto the next one.
|
||
|
||
### Creating a pattern with code
|
||
|
||
What if we wanted to find all `sentences` that mention a color?
|
||
The basic idea is simple: we just combine alternation with word boundaries.
|
||
|
||
```{r}
|
||
str_view(sentences, "\\b(red|green|blue)\\b")
|
||
```
|
||
|
||
But as the number of colours grows, it would quickly get tedious to construct this pattern by hand.
|
||
Wouldn't it be nice if we could store the colours in a vector?
|
||
|
||
```{r}
|
||
rgb <- c("red", "green", "blue")
|
||
```
|
||
|
||
Well, we can!
|
||
We'd just need to create the pattern from the vector using `str_c()` and `str_flatten()`:
|
||
|
||
```{r}
|
||
str_c("\\b(", str_flatten(rgb, "|"), ")\\b")
|
||
```
|
||
|
||
We could make this pattern more comprehensive if we had a good list of colors.
|
||
One place we could start from is the list of built-in colours that R can use for plots:
|
||
|
||
```{r}
|
||
str_view(colors())
|
||
```
|
||
|
||
But lets first element the numbered variants:
|
||
|
||
```{r}
|
||
cols <- colors()
|
||
cols <- cols[!str_detect(cols, "\\d")]
|
||
str_view(cols)
|
||
```
|
||
|
||
Then we can turn this into one giant pattern:
|
||
|
||
```{r}
|
||
pattern <- str_c("\\b(", str_flatten(cols, "|"), ")\\b")
|
||
str_view(sentences, pattern)
|
||
```
|
||
|
||
In this example `cols` only contains numbers and letters so you don't need to worry about special characters.
|
||
But generally, when creating patterns from existing strings it's wise to run them through `str_escape()` which will automatically escape any special characters.
|
||
|
||
### Exercises
|
||
|
||
1. For each of the following challenges, try solving it by using both a single regular expression, and a combination of multiple `str_detect()` calls.
|
||
|
||
a. Find all `words` that start or end with `x`.
|
||
b. Find all `words` that start with a vowel and end with a consonant.
|
||
c. Are there any `words` that contain at least one of each different vowel?
|
||
|
||
2. Construct patterns to find evidence for and against the rule "i before e except after c"?
|
||
|
||
3. `colors()` contains a number of modifiers like "lightgray" and "darkblue".
|
||
How could you automatically identify these modifiers?
|
||
(Think about how you might detect and removed what colors are being modified).
|
||
|
||
4. Create a regular expression that finds any base R dataset.
|
||
You can get a list of these datasets via a special use of the `data()` function: `data(package = "datasets")$results[, "Item"]`.
|
||
Note that a number of old datasets are individual vectors; these contain the name of the grouping "data frame" in parentheses, so you'll need to also strip these off.
|
||
|
||
## Elsewhere
|
||
|
||
The are a bunch of other places you can use regular expressions outside of stringr.
|
||
|
||
### stringr
|
||
|
||
- `str_locate()`, `str_locate_all()`
|
||
- `str_split()` and friends
|
||
- `str_extract()`
|
||
|
||
### tidyverse
|
||
|
||
- `matches()`: a "tidyselect" function that you can use anywhere in the tidyverse when selecting variables (e.g. `dplyr::select()`, `rename_with()`, `across()`, ...).
|
||
|
||
- `names_pattern` in `pivot_longer()`
|
||
|
||
- `delim` in `separate_delim_longer()` and `separate_delim_wider()`.
|
||
By default it matches a fixed string, but you can use `regex()` to make it match a pattern.
|
||
`regex(", ?")` is particularly useful.
|
||
|
||
### Base R
|
||
|
||
The regular expressions used by stringr are very slightly different to those of base R.
|
||
That's because stringr is built on top of the [stringi package](https://stringi.gagolewski.com), which is in turn built on top of the [ICU engine](https://unicode-org.github.io/icu/userguide/strings/regexp.html), whereas base R functions (like `gsub()` and `grepl()`) use either the [TRE engine](https://github.com/laurikari/tre) or the [PCRE engine](https://www.pcre.org).
|
||
Fortunately, the basics of regular expressions are so well established that you'll encounter few variations when working with the patterns you'll learn in this book (and we'll point them out where important).
|
||
You only need to be aware of the difference when you start to rely on advanced features like complex Unicode character ranges or special features that use the `(?…)` syntax.
|
||
You can learn more about these advanced features in `vignette("regular-expressions", package = "stringr")`.
|
||
|
||
`apropos()` searches all objects available from the global environment.
|
||
This is useful if you can't quite remember the name of the function.
|
||
|
||
```{r}
|
||
apropos("replace")
|
||
```
|
||
|
||
`dir()` lists all the files in a directory.
|
||
The `pattern` argument takes a regular expression and only returns file names that match the pattern.
|
||
For example, you can find all the R Markdown files in the current directory with:
|
||
|
||
```{r}
|
||
head(dir(pattern = "\\.Rmd$"))
|
||
```
|
||
|
||
(If you're more comfortable with "globs" like `*.Rmd`, you can convert them to regular expressions with `glob2rx()`).
|
||
|
||
## Summary
|
||
|
||
To continue learning about regular expressions, start with `vignette("regular-expressions", package = "stringr")`: it documents the full set of syntax supported by stringr.
|
||
Don't forget that stringr is implemented on top of stringi, so if you're struggling to find a function that does what you need, don't be afraid to look in stringi too.
|
||
You'll find it very easy to pick up because it follows the same conventions as stringr.
|
||
|
||
Another useful reference is [https://www.regular-expressions.info/](https://www.regular-expressions.info/tutorial.html).
|
||
It's not R specific, but it covers the most advanced features and explains how regular expressions work under the hood.
|
||
|
||
In the next chapter, we'll talk about a data structure closely related to strings: factors.
|
||
Factors are used to represent categorical data in R, data where there is a fixed and known set of possible values identified by a vector of strings.
|